rs485471 chr6:167815931 C>G
- Sequence
gaaggtgaaattccgtgtgcttag[C/G]agaggacaattcaaacgggtgtcc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MITF_HUMAN GABP1_HUMAN IKZF1_HUMAN MGAP_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MITF_HUMAN | 2.68 | -2.49 | 1.00 | n/a | No Hit | |||
| GABP1_HUMAN | 2.41 | -2.62 | 1.00 | n/a | n/a | |||
| IKZF1_HUMAN | 2.39 | -1.36 | 1.33 | n/a | No Hit | |||
| MGAP_HUMAN | 2.56 | -2.81 | 1.33 | n/a | n/a | |||
| EP400_HUMAN | 2.64 | n/a | 1.33 | n/a | n/a |
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