ADASTRA v1.6.10
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rs485618
chr1:160830690
T
>
C
Sequence
tgtgctctgggtgatttttctact[T/C]agagatgggcttgctttgcaccat
ASB in cell types
A549 (lung carcinoma)
MCF7 (Invasive ductal breast carcinoma)
PANC1 (pancreatic ductal adenocarcinoma)
ASB for transcription factors
RAD21_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
RAD21_HUMAN
0.80
-0.21
5.4·10
-4
0.96
1.79
n/a
n/a
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
graves disease
,
hip bone mineral density (bmd)
,
salmonella-induced pyroptosis
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)