rs487105 chr11:64779419 G>A
- Sequence
attggaatctccacggagttcaga[G/A]gatttaattaaatgatcttaaaat
- ASB in cell types
- K562 (myelogenous leukemia) GM12878 (female B-cells)
- ASB for transcription factors
- COT1_HUMAN RELB_HUMAN SMCA4_HUMAN RFX1_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| COT1_HUMAN | -0.18 | 1.64 | 1.78 | n/a | No Hit | |||
| RELB_HUMAN | -1.51 | 1.74 | 1.00 | n/a | No Hit | |||
| SMCA4_HUMAN | -1.80 | 2.26 | 2.00 | n/a | n/a | |||
| RFX1_HUMAN | n/a | 0.58 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Aorta, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Brain_Cortex, Cells_Cultured_fibroblasts, Esophagus_Gastroesophageal_Junction, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Sun_Exposed_Lower_leg, Spleen, Testis, Thyroid, Whole_Blood