rs4871839 chr8:21874947 T>G
- Sequence
taccggagctgcaaggccacctgg[T/G]ggccacagaaggagttgtctaacc
- ASB in cell types
- bipolar neuron LNCaP (prostate carcinoma) GM23338 LNCaP C4-2B (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.96 | 0.55 | 1.59 | -5.14 | Concordant |
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Motif analysis
