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rs492607 chr11:83584268 T>C

Sequence
tctaacacagtgctaagcatgtag[T/C]agtgtttaaaacattcgtcttgtc
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
MEF2B_HUMAN JUNB_HUMAN IKZF2_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MEF2B_HUMAN 2.49 -2.54 1.2·10-41.00 1.33 n/a No Hit
JUNB_HUMAN 1.89 n/a 1.0·10-21.00 1.33 n/a No Hit
IKZF2_HUMAN 1.50 -1.78 0.041.00 1.33 n/a n/a
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Motif analysis

No data available

Genetic associations

GRASP myopia
GTEx eQTL Artery_Aorta Artery_Coronary Artery_Tibial Cells_Cultured_fibroblasts Muscle_Skeletal Pancreas Stomach Thyroid

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