rs492829 chr12:5200661 T>C
- Sequence
ttaccttgttcttcccagaagcct[T/C]gttcagcaagaggagggaggccga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) LNCaP (prostate carcinoma) erythroid progenitors foreskin keratinocyte
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.83 | 0.75 | 1.53 | n/a | No Hit | |||
| RAD21_HUMAN | 1.32 | -0.63 | 1.71 | n/a | n/a |
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