rs4940686 chr18:58407586 C>T
- Sequence
gagtacactctgatgtttgcacaa[C/T]gatgaaatcgcataacaacgcatt
- ASB in cell types
- HepG2 (hepatoblastoma)
- ASB for transcription factors
- CEBPG_HUMAN CEBPA_HUMAN BCL6_HUMAN ATF7_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CEBPG_HUMAN | -2.59 | 2.11 | 1.42 | 4.57 | Concordant | |||
| CEBPA_HUMAN | 0.48 | 1.98 | 1.42 | -0.29 | Weak Discordant | |||
| BCL6_HUMAN | -1.83 | 1.60 | 1.50 | n/a | No Hit | |||
| ATF7_HUMAN | -1.35 | 1.72 | 1.33 | n/a | n/a |
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Motif analysis
