rs4945705 chr6:122697845 G>A
- Sequence
aatctagtgtctaaaactgcaaat[G/A]agataaggaatatcctgttgaggc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- ESR1_HUMAN RFX1_HUMAN GATA3_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -0.36 | 1.35 | 1.48 | n/a | No Hit | |||
| RFX1_HUMAN | -1.80 | 2.12 | 1.33 | n/a | No Hit | |||
| GATA3_HUMAN | -0.90 | 1.40 | 1.33 | 0.59 | Weak Concordant | |||
| FOXA1_HUMAN | -0.42 | 1.16 | 1.44 | n/a | No Hit |
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Motif analysis
