rs4945872 chr6:111057556 C>T
- Sequence
acaaaatatctctggaagtacaca[C/T]ggcagactagaactgtttgatgag
- ASB in cell types
- A549 (lung carcinoma) Peyer's patch prostate gland thyroid gland
- ASB for transcription factors
- CTCF_HUMAN RAD21_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.47 | 0.89 | 1.33 | n/a | No Hit | |||
| RAD21_HUMAN | 0.02 | 0.82 | 1.25 | n/a | n/a | |||
| SMC3_HUMAN | 0.15 | 0.94 | 1.18 | n/a | n/a |
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