ADASTRA v1.6.10
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rs498292
chr11:83192241
C
>
T
Sequence
ataagcaattgctacaaaagcatg[C/T]attcccaaggatgtaagacatgtg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
ZNF24_HUMAN
MTG16_HUMAN
HDAC1_HUMAN
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Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
ZNF24_HUMAN
1.58
-0.70
4.7·10
-3
1.00
1.87
n/a
n/a
MTG16_HUMAN
2.14
-3.03
0.03
1.00
2.00
n/a
n/a
HDAC1_HUMAN
1.62
0.12
0.05
0.94
2.00
n/a
n/a
Items per page:
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Motif analysis
No data available
Genetic associations
GTEx eQTL
Brain_Nucleus_accumbens_basal_ganglia
,
Cells_Cultured_fibroblasts
,
Pancreas
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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log2(Alt/Ref motif p-value)