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rs498373 chr6:70310627 C>T

Sequence
ggttaagaatgtgggctctggaac[C/T]agattgcttaggttcaaatctcag
ASB in cell types
PANC1 (pancreatic ductal adenocarcinoma)
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.87 0.57 0.031.00 1.29 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP major depressive disorder (narrow definition) major depressive disorder (narrow definition) (females)
GTEx eQTL Adipose_Visceral_Omentum Brain_Caudate_basal_ganglia Brain_Cortex Brain_Frontal_Cortex_BA9 Brain_Hippocampus

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