rs498393 chr1:66301115 A>G
- Sequence
ttcctgcgtgctcatgaaaggccc[A/G]tagtacagctatgagtatattcca
- ASB in cell types
- GM12878 (female B-cells)
- ASB for transcription factors
- ZN217_HUMAN PAX8_HUMAN IKZF1_HUMAN IKZF2_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZN217_HUMAN | -2.18 | 2.35 | 1.33 | n/a | n/a | |||
| PAX8_HUMAN | -2.31 | 2.36 | 1.33 | n/a | n/a | |||
| IKZF1_HUMAN | -1.01 | 1.49 | 1.33 | n/a | No Hit | |||
| IKZF2_HUMAN | -0.75 | 1.49 | 1.33 | n/a | n/a | |||
| SKIL_HUMAN | -1.86 | 1.92 | 1.33 | n/a | n/a |
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