ADASTRA v1.6.10
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Soos
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adastra.autosome.org
rs500197
chr6:13395379
A
>
G
Sequence
cactggatccatgataaagagcct[A/G]taaaccacccgataaaactcatat
ASB in cell types
SK-N-SH (neuroblastoma)
ASB for transcription factors
COE3_HUMAN
TAL1_HUMAN
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
COE3_HUMAN
3.13
-0.84
8.1·10
-7
0.97
1.33
n/a
n/a
TAL1_HUMAN
-1.62
1.90
1.00
0.02
1.50
n/a
No Hit
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
,
Artery_Aorta
,
Artery_Tibial
,
Brain_Cerebellar_Hemisphere
,
Brain_Cerebellum
,
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Muscle_Skeletal
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)