ADASTRA v1.6.10
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rs5010
chr11:10307697
T
>
C
Sequence
tagtgggttggcgagcctggactc[T/C]cgggttgcgcaacggagtcctaga
ASB in cell types
A549 (lung carcinoma)
macrophages
ASB for transcription factors
CEBPB_HUMAN
JUN_HUMAN
RAD21_HUMAN
Search SNPs nearby
View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CEBPB_HUMAN
3.03
-0.15
2.4·10
-7
1.00
2.50
n/a
No Hit
JUN_HUMAN
1.20
-0.35
3.1·10
-3
0.90
2.00
n/a
No Hit
RAD21_HUMAN
1.01
-0.25
8.6·10
-3
0.77
2.00
n/a
n/a
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Motif analysis
No data available
Genetic associations
GRASP
body mass index (bmi)
,
obesity (body mass index (bmi))
,
triglycerides change with statins
,
urinary albumin-to-creatinine ratio
GTEx eQTL
Skin_Sun_Exposed_Lower_leg
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)