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rs501987 chr6:13383598 T>C

Sequence
aagtttgagaagtgcagtgcccca[T/C]aggcatacacatctcattgttaaa
ASB in cell types
GM12878 (female B-cells) foreskin keratinocyte
ASB for transcription factors
FOXK2_HUMAN CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
FOXK2_HUMAN 2.31 -2.62 3.4·10-41.00 1.33 n/a n/a
CTCF_HUMAN -0.10 1.02 1.003.0·10-3 1.50 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP hdl cholesterol
GTEx eQTL Brain_Caudate_basal_ganglia

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