rs502419 chr11:60098702 G>A
- Sequence
cccatagccagaaaacagaatgta[G/A]ggacaatcaccagccatcttttgt
- ASB in cell types
- HepG2 (hepatoblastoma) primary endothelial colony-forming cells
- ASB for transcription factors
- SOX13_HUMAN TAL1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SOX13_HUMAN | -1.96 | 1.77 | 1.33 | n/a | n/a | |||
| TAL1_HUMAN | 1.47 | -0.42 | 1.50 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP advanced age-related macular degeneration (choroidal neovascularization) vs. no amd, infant head circumference, total cholesterol, triglycerides
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Tibial, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Pancreas, Skin_Sun_Exposed_Lower_leg, Spleen, Stomach, Thyroid, Whole_Blood