rs502834 chr11:133947438 G>A
- Sequence
cttctggtcccaggccgggcaccc[G/A]actctccagggcagcacctaggac
- ASB in cell types
- K562 (myelogenous leukemia) HL-60 (acute myeloid leukemia)
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Cell type | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | |
|---|---|---|---|---|---|---|
| K562 (myelogenous leukemia) | 1.77 | -0.25 | 2.00 | |||
| HL-60 (acute myeloid leukemia) | -1.86 | 1.66 | 1.33 |
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Motif analysis
No data available
Genetic associations
GRASP barnes akathisia rating scale, biploar disorder (bipolar schizoaffective disorder), major depressive disorder (broad definition) (females), major depressive disorder (broad definition) (males), parkinsons disease, prostate cancer
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Artery_Aorta, Artery_Coronary, Artery_Tibial, Brain_Cerebellar_Hemisphere, Brain_Cerebellum, Breast_Mammary_Tissue, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Atrial_Appendage, Lung, Nerve_Tibial, Ovary, Pancreas, Pituitary, Prostate, Spleen, Stomach, Testis, Thyroid, Whole_Blood