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rs5030178 chr11:32427023 A>C

Sequence
gccccgggtccccgcgcggagggg[A/C]gggaggatggggatgggtttgggg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
MNT_HUMAN ARI1B_HUMAN ATF3_HUMAN KDM1A_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (A) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MNT_HUMAN 2.16 n/a 3.7·10-41.00 2.00 n/a n/a
ARI1B_HUMAN 2.61 n/a 1.3·10-31.00 2.00 n/a n/a
ATF3_HUMAN 2.59 n/a 2.0·10-31.00 2.00 n/a No Hit
KDM1A_HUMAN 1.95 -1.87 4.4·10-31.00 2.00 n/a n/a
RING2_HUMAN 2.45 -3.72 7.4·10-31.00 2.00 n/a n/a
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Motif analysis

No data available

Genetic associations

GTEx eQTL Esophagus_Muscularis Heart_Left_Ventricle Spleen

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