rs503112 chr15:92655283 C>A
- Sequence
ggttggcgatgccgccctgtcggc[C/A]ggcgggggaaggaagagggcggga
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma)
- ASB for transcription factors
- E2F6_HUMAN ESR1_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| E2F6_HUMAN | -1.55 | 1.79 | 1.33 | 2.21 | Concordant | |||
| ESR1_HUMAN | 1.61 | -0.15 | 2.25 | n/a | No Hit |
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Motif analysis
Genetic associations
GTEx eQTL Artery_Aorta, Artery_Tibial, Cells_Cultured_fibroblasts, Colon_Sigmoid, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Thyroid