rs503325 chr6:73339590 T>C
- Sequence
atggcctagagaagagagccagcg[T/C]gagtcatcctgagaagaagtcagc
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) coronary artery smooth muscle
- ASB for transcription factors
- FOS_HUMAN JUND_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOS_HUMAN | 3.50 | n/a | 1.33 | n/a | n/a | |||
| JUND_HUMAN | 1.75 | -1.78 | 1.33 | -6.24 | Concordant |
Items per page:
1 – 2 of 2
Motif analysis
Genetic associations
GTEx eQTL Brain_Cerebellum, Breast_Mammary_Tissue, Esophagus_Mucosa, Esophagus_Muscularis, Heart_Left_Ventricle, Lung, Muscle_Skeletal, Nerve_Tibial, Pituitary, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Thyroid