rs5053 chr7:134459111 G>C
- Sequence
gcccagtacggtgcggccttggcc[G/C]cggcgcgtacctttaaatagcccg
- ASB in cell types
- MM1.S (plasma cell myeloma)
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.34 | 0.66 | 1.83 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adrenal_Gland, Esophagus_Mucosa, Heart_Atrial_Appendage, Heart_Left_Ventricle, Pancreas, Skin_Not_Sun_Exposed_Suprapubic, Testis, Thyroid