ADASTRA v1.6.10
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rs511401
chr11:119379350
C
>
G
Sequence
atcgggagattcaagaggaaagag[C/G]attgaaaagagcacagaggggtgg
ASB in cell types
K562 (myelogenous leukemia)
ASB for transcription factors
MNT_HUMAN
HDAC1_HUMAN
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View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
MNT_HUMAN
0.04
1.58
0.87
0.01
2.00
n/a
n/a
HDAC1_HUMAN
-0.88
1.47
0.99
0.02
2.00
n/a
n/a
Items per page:
5
1 – 2 of 2
Motif analysis
No data available
Genetic associations
GRASP
cystatin c in serum
GTEx eQTL
Adipose_Subcutaneous
,
Adrenal_Gland
,
Artery_Aorta
,
Artery_Tibial
,
Breast_Mammary_Tissue
,
Cells_Cultured_fibroblasts
,
Colon_Sigmoid
,
Esophagus_Mucosa
,
Esophagus_Muscularis
,
Heart_Left_Ventricle
,
Lung
,
Pituitary
,
Skin_Sun_Exposed_Lower_leg
,
Thyroid
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)