rs511716 chr2:164484989 T>C
- Sequence
ttggatatacttgtatgtttattc[T/C]tgtggacaaagttagaaccattgc
- ASB in cell types
- VCaP (prostate carcinoma) LHSAR (prostate epithelial cells) LNCaP (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | 1.39 | -0.47 | 1.80 | -3.48 | Concordant | |||
| ANDR_HUMAN | 1.69 | -0.69 | 1.75 | -0.56 | Weak Concordant |
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Motif analysis
