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rs511893 chr16:88924533 T>G

Sequence
aagagcgggcggagggcccagtgg[T/G]ggctgcgggggccaccagggcagc
ASB for transcription factors
CTCF_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (G) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN 0.80 0.05 0.041.00 1.22 0.98 Weak Discordant
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Motif analysis

CTCF_HUMAN Weak Discordant
CTCF_HUMAN pic

Genetic associations

GTEx eQTL Artery_Aorta Nerve_Tibial Pancreas Skin_Sun_Exposed_Lower_leg Thyroid

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