Attention! You are using release Soos. You can switch to the latest ADASTRA version: adastra.autosome.org

rs5130 chr11:116832430 C>T

Sequence
gccaccaggttgtgcaactccagg[C/T]ggtgctgtttgcacagaaaacaat
ASB in cell types
MDA-MB-453 (breast adenocarcinoma)

Color scale

color scale ref
-log10 FDR of Ref (C) ASB
color scale alt
-log10 FDR of Alt (T) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
MDA-MB-453 (breast adenocarcinoma) 1.42 -1.73 0.051.00 1.50
Items per page:
1 – 1 of 1

Motif analysis

No data available

Genetic associations

GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Adrenal_Gland Artery_Aorta Artery_Coronary Artery_Tibial Brain_Cerebellum Brain_Cortex Brain_Hypothalamus Brain_Nucleus_accumbens_basal_ganglia Breast_Mammary_Tissue Cells_Cultured_fibroblasts Colon_Sigmoid Colon_Transverse Esophagus_Gastroesophageal_Junction Esophagus_Mucosa Esophagus_Muscularis Heart_Atrial_Appendage Heart_Left_Ventricle Liver Lung Minor_Salivary_Gland Muscle_Skeletal Nerve_Tibial Ovary Pancreas Pituitary Prostate Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Small_Intestine_Terminal_Ileum Spleen Stomach Testis Thyroid Uterus Vagina Whole_Blood

Download