rs513140 chr10:8051982 T>C
- Sequence
catccccctcccatccttttccct[T/C]ccccgctgccctgtgctccgggct
- ASB in cell types
- MCF7 (Invasive ductal breast carcinoma) MCF-7 C4-12 (invasive breast ductal carcinoma) breast tumor tissue
- ASB for transcription factors
- ZFX_HUMAN CREB1_HUMAN ESR1_HUMAN GATA3_HUMAN
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-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ZFX_HUMAN | -3.16 | 2.21 | 1.50 | n/a | No Hit | |||
| CREB1_HUMAN | -0.21 | 0.83 | 2.11 | n/a | No Hit | |||
| ESR1_HUMAN | -2.26 | 2.33 | 2.00 | n/a | No Hit | |||
| GATA3_HUMAN | -1.74 | 1.88 | 1.50 | n/a | No Hit |
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