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rs513235 chr5:179822099 T>A

Sequence
caccttataaacgccatacatacc[T/A]tttatcaccctcttatccacatgc
ASB in cell types
A549 (lung carcinoma) GM12878 (female B-cells) K562 (myelogenous leukemia)
ASB for transcription factors
IKZF1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN 1.26 -0.62 0.051.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP obesity with early age of onset (age >2)
GTEx eQTL Artery_Aorta Artery_Tibial Brain_Hypothalamus Brain_Putamen_basal_ganglia Cells_Cultured_fibroblasts Esophagus_Muscularis Heart_Left_Ventricle Muscle_Skeletal Testis Thyroid

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