rs514773 chr1:27044779 G>A
- Sequence
tcttagcagaggaagctgtttgcg[G/A]ggaaaaagggccagagaagcaggt
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) neutrophils monocyte-derived macrophages
- ASB for transcription factors
- NCOA2_HUMAN SPI1_HUMAN CTCF_HUMAN
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-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NCOA2_HUMAN | n/a | 2.59 | 1.33 | n/a | n/a | |||
| SPI1_HUMAN | -0.85 | 1.67 | 2.17 | n/a | No Hit | |||
| CTCF_HUMAN | 0.55 | 0.86 | 1.57 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GTEx eQTL Adipose_Subcutaneous, Artery_Tibial, Brain_Cortex, Cells_Cultured_fibroblasts, Esophagus_Mucosa, Esophagus_Muscularis, Nerve_Tibial