rs516423 chr19:3710533 C>T
- Sequence
gtgcttcctcgtggccctgagtcc[C/T]ggggaaagtccagggcagggagta
- ASB in cell types
- CD14+ monocytes breast tumor tissue SK-BR-3 (breast adenocarcinoma) CWR22 (prostate carcinoma)
- ASB for transcription factors
- ESR1_HUMAN STAT1_HUMAN ANDR_HUMAN AP2C_HUMAN
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-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ESR1_HUMAN | -2.11 | 2.82 | 2.33 | n/a | No Hit | |||
| STAT1_HUMAN | -2.91 | 2.03 | 2.50 | n/a | No Hit | |||
| ANDR_HUMAN | 0.10 | 1.09 | 1.53 | n/a | No Hit | |||
| AP2C_HUMAN | -3.87 | 2.10 | 2.50 | n/a | No Hit |
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