rs518272 chr11:57250083 T>C
- Sequence
ctgaaatctctttcgatacactca[T/C]taattttagcatgggaaaaagggt
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- RAD21_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| RAD21_HUMAN | 0.90 | -0.26 | 2.00 | n/a | n/a | |||
| CTCF_HUMAN | 0.64 | 0.31 | 1.49 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP height, ldl cholesterol, total cholesterol, total cholesterol change with statins, triglycerides change with statins
GTEx eQTL Adipose_Subcutaneous, Adipose_Visceral_Omentum, Adrenal_Gland, Colon_Transverse, Esophagus_Mucosa, Esophagus_Muscularis, Liver, Muscle_Skeletal, Nerve_Tibial, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid