ADASTRA v1.6.10
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rs519536
chr12:5114742
T
>
C
Sequence
caaggatgttgatgtttcagaaaa[T/C]ctttgccttgtgggcgtgccatta
ASB in cell types
LHSAR (prostate epithelial cells)
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
LHSAR (prostate epithelial cells)
1.18
-1.50
0.03
1.00
1.50
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
cystatin c in serum
,
obesity with early age of onset (age >2)
,
serum creatinine
GTEx eQTL
Colon_Transverse
,
Esophagus_Mucosa
,
Minor_Salivary_Gland
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Vagina
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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