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rs520420 chr11:132337345 T>C

Sequence
ataagaggaactgagagacagaaa[T/C]gggtccgagccaaaacactcagga
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF1_HUMAN IKZF2_HUMAN SPI1_HUMAN

Color scale

color scale ref
-log10 FDR of Ref (T) ASB
color scale alt
-log10 FDR of Alt (C) ASB

Details

Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN 1.63 -0.96 5.1·10-31.00 1.33 n/a No Hit
IKZF2_HUMAN 1.55 -1.19 0.011.00 1.33 n/a n/a
SPI1_HUMAN 1.41 -1.29 0.041.00 1.33 n/a No Hit
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Motif analysis

No data available

Genetic associations

GRASP asthma suicide attempts in bipolar disorder (substance abuse/dependence) triglycerides

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