ADASTRA v1.6.10
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rs520420
chr11:132337345
T
>
C
Sequence
ataagaggaactgagagacagaaa[T/C]gggtccgagccaaaacactcagga
ASB in cell types
GM12878 (female B-cells)
ASB for transcription factors
IKZF1_HUMAN
IKZF2_HUMAN
SPI1_HUMAN
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Color scale
-log10 FDR of Ref (
T
) ASB
-log10 FDR of Alt (
C
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
IKZF1_HUMAN
1.63
-0.96
5.1·10
-3
1.00
1.33
n/a
No Hit
IKZF2_HUMAN
1.55
-1.19
0.01
1.00
1.33
n/a
n/a
SPI1_HUMAN
1.41
-1.29
0.04
1.00
1.33
n/a
No Hit
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Motif analysis
No data available
Genetic associations
GRASP
asthma
,
suicide attempts in bipolar disorder (substance abuse/dependence)
,
triglycerides
GTEx eQTL
Testis
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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log2(Alt/Ref motif p-value)