rs520905 chr11:94658679 C>T
- Sequence
aaatactttgtgcctttattgtcc[C/T]gcccagaggcagaaaagacacaag
- ASB in cell types
- VCaP (prostate carcinoma) CWR22 (prostate carcinoma)
- ASB for transcription factors
- ANDR_HUMAN FOXA1_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ANDR_HUMAN | -0.10 | 1.15 | 1.44 | n/a | No Hit | |||
| FOXA1_HUMAN | 0.34 | 1.06 | 1.43 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP adiponectin levels, diastolic blood pressure (dbp), fasting blood glucose, homa-b, systolic blood pressure (sbp), transmission distortion, waist hip ratio