rs521734 chr1:109090634 C>G
- Sequence
agacttagttaccacggccaagta[C/G]gaagccttcgagatagcgttcttc
- ASB in cell types
- HEK293 (embryonic kidney) HepG2 (hepatoblastoma) VCaP (prostate carcinoma)
- ASB for transcription factors
- SP7_HUMAN ZN629_HUMAN ZEB2_HUMAN MAX_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SP7_HUMAN | n/a | 2.89 | 2.00 | n/a | n/a | |||
| ZN629_HUMAN | n/a | 2.49 | 2.00 | n/a | n/a | |||
| ZEB2_HUMAN | -0.38 | 1.57 | 1.56 | n/a | n/a | |||
| MAX_HUMAN | 0.87 | 0.11 | 1.45 | n/a | No Hit | |||
| ZBT20_HUMAN | -1.79 | 2.22 | 2.00 | n/a | n/a |
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