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rs522769 chr19:45781262 G>A

Sequence
ggccagacatatgagggccagagg[G/A]gcagggtgctgggaatgaaagaaa
ASB in cell types
K562 (myelogenous leukemia)

Color scale

color scale ref
-log10 FDR of Ref (G) ASB
color scale alt
-log10 FDR of Alt (A) ASB

Details

Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
K562 (myelogenous leukemia) 0.11 0.57 0.935.4·10-3 2.00
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Motif analysis

No data available

Genetic associations

GRASP advanced age-related macular degeneration hdl cholesterol height refractive error triglycerides
GTEx eQTL Adipose_Subcutaneous Adipose_Visceral_Omentum Artery_Aorta Artery_Tibial Brain_Anterior_cingulate_cortex_BA24 Brain_Cerebellar_Hemisphere Brain_Cerebellum Brain_Nucleus_accumbens_basal_ganglia Breast_Mammary_Tissue Colon_Sigmoid Colon_Transverse Esophagus_Mucosa Esophagus_Muscularis Liver Lung Nerve_Tibial Pancreas Prostate Skin_Not_Sun_Exposed_Suprapubic Skin_Sun_Exposed_Lower_leg Spleen Testis Thyroid Whole_Blood

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