rs523791 chr3:8138211 G>A
- Sequence
ttttatttatttaaagaaataaac[G/A]gagggtgacattaagcaaatatga
- ASB in cell types
- LNCaP (prostate carcinoma) VCaP (prostate carcinoma) LNCaP C4-2 (prostate carcinoma)
- ASB for transcription factors
- FOXA1_HUMAN ANDR_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| FOXA1_HUMAN | -1.66 | 2.24 | 1.50 | 4.38 | Concordant | |||
| ANDR_HUMAN | 0.07 | 1.92 | 1.52 | 4.77 | Concordant |
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Motif analysis
