rs526936 chr1:234716457 G>A
- Sequence
caggttgtacaacttcaatcgtcc[G/A]gcaggcccgtgagcaccttcggtg
- ASB in cell types
- K562 (myelogenous leukemia) uterus HepG2 (hepatoblastoma)
- ASB for transcription factors
- CTCF_HUMAN HNF4A_HUMAN MNT_HUMAN MTG8R_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 0.04 | 1.08 | 1.24 | n/a | No Hit | |||
| HNF4A_HUMAN | -0.37 | 1.03 | 1.33 | n/a | No Hit | |||
| MNT_HUMAN | 0.34 | 1.79 | 2.04 | n/a | n/a | |||
| MTG8R_HUMAN | n/a | 2.13 | 3.00 | n/a | n/a | |||
| NR2C1_HUMAN | -3.98 | 2.22 | 2.50 | n/a | No Hit |
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