rs527958 chr1:234716584 C>T
- Sequence
cccagagagacatctggacagaga[C/T]gtcaaaatacaaaacaataaattc
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- MEIS2_HUMAN PBX2_HUMAN FOXK2_HUMAN NFIC_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| MEIS2_HUMAN | n/a | 3.30 | 2.50 | 3.76 | Concordant | |||
| PBX2_HUMAN | n/a | 3.06 | 2.50 | n/a | No Hit | |||
| FOXK2_HUMAN | -0.22 | 2.23 | 2.33 | n/a | n/a | |||
| NFIC_HUMAN | n/a | 2.59 | 2.50 | n/a | No Hit | |||
| MNT_HUMAN | -0.72 | 1.74 | 2.83 | n/a | n/a |
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Motif analysis
