ADASTRA v1.6.10
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rs528774
chr1:234475586
C
>
A
Sequence
gttagggccaggaacctaaacgca[C/A]ccctaagttggaggcaacgattat
ASB in cell types
HEK293 (embryonic kidney)
HEK293T (embryonic kidney)
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View in UCSC Genome Browser
View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
Selected columns
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
-0.51
1.03
1.00
1.5·10
-10
3.62
HEK293T (embryonic kidney)
-0.53
0.91
0.97
0.03
2.00
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5
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Motif analysis
No data available
Genetic associations
GRASP
hdl cholesterol change with statins
,
ldl cholesterol
,
ldl cholesterol change with statins
,
total cholesterol change with statins
GTEx eQTL
Adipose_Subcutaneous
,
Lung
,
Muscle_Skeletal
,
Testis
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale