ADASTRA v1.6.10
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rs531653
chr7:15721052
C
>
T
Sequence
aaaagaagaaggaatgtttttata[C/T]gtaacaatgaatcacatcctgaca
ASB in cell types
foreskin keratinocyte
A549 (lung carcinoma)
ASB for transcription factors
CTCF_HUMAN
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View in PheLiGe
Color scale
-log10 FDR of Ref (
C
) ASB
-log10 FDR of Alt (
T
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+6 others)
Selected columns
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Uniprot ID
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
Motif fold change
Motif concordance
CTCF_HUMAN
0.66
0.63
0.01
0.57
1.57
n/a
No Hit
Items per page:
5
1 – 1 of 1
Motif analysis
No data available
Genetic associations
GRASP
adiponectin levels
,
amyotrophic lateral sclerosis (als)
,
homa-b
,
infant head circumference
,
sporadic creutzfeldt-jakob disease
GTEx eQTL
Adipose_Subcutaneous
,
Adipose_Visceral_Omentum
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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+/-100bp
log2-scale
log2(Alt/Ref motif p-value)