rs532075 chr1:15100621 C>T
- Sequence
ccggcttgaaaattcaagcacttg[C/T]gcacctgctgtatacgtggtacag
- ASB in cell types
- HEK293 (embryonic kidney) MCF7 (Invasive ductal breast carcinoma) foreskin keratinocyte K562 (myelogenous leukemia)
- ASB for transcription factors
- NRF1_HUMAN CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (T) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| NRF1_HUMAN | 2.92 | -0.83 | 1.33 | -4.61 | Concordant | |||
| CTCF_HUMAN | 0.53 | 0.73 | 1.45 | n/a | No Hit |
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Motif analysis
