rs532568670 chr1:30111576 A>G
- Sequence
cgtggggaggggagtggcgggggg[A/G]ggtggattaggtccagaaaagcgc
- ASB in cell types
- HEK293 (embryonic kidney) epithelial cell of prostate
- ASB for transcription factors
- CTCF_HUMAN ZN341_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.23 | 0.40 | 1.72 | n/a | No Hit | |||
| ZN341_HUMAN | 2.59 | n/a | 2.00 | -2.87 | Concordant |
Items per page:
1 – 2 of 2
Motif analysis
