rs532972 chr1:201463174 T>C
- Sequence
ccctttgcagccaagctctgagaa[T/C]gacccctagtgctggacagagaaa
- ASB in cell types
- HepG2 (hepatoblastoma) SUM159PT (pleiomorphic breast carcinoma) H54 RWPE2
- ASB for transcription factors
- CTCF_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | -0.05 | 1.53 | 1.62 | 0.37 | Weak Concordant |
Items per page:
1 – 1 of 1
Motif analysis
