ADASTRA v1.6.10
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rs533795
chr1:179937043
G
>
A
Sequence
aaagcatcaacagcagaattgatc[G/A]aacagaagaatcagtgagcttgaa
ASB in cell types
HEK293 (embryonic kidney)
K562 (myelogenous leukemia)
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Color scale
-log10 FDR of Ref (
G
) ASB
-log10 FDR of Alt (
A
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
HEK293 (embryonic kidney)
0.49
-0.28
1.4·10
-3
1.00
2.02
K562 (myelogenous leukemia)
-0.59
0.63
1.00
2.4·10
-3
2.86
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5
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Motif analysis
No data available
Genetic associations
GRASP
aortic valve calcium
,
college completion
,
ldl cholesterol
GTEx eQTL
Artery_Aorta
,
Artery_Tibial
,
Brain_Anterior_cingulate_cortex_BA24
,
Brain_Cerebellum
,
Cells_Cultured_fibroblasts
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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