rs534411612 chr16:66873378 T>A
- Sequence
gagcctcggaggttcggagtctcc[T/A]ctcccagcttcctcttctccgtcc
- ASB in cell types
- A549 (lung carcinoma)
- ASB for transcription factors
- CTCF_HUMAN SMC3_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (T) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.07 | -0.10 | 1.90 | n/a | No Hit | |||
| SMC3_HUMAN | 0.75 | -0.38 | 2.00 | n/a | n/a |
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