rs535070 chr16:88812323 A>G
- Sequence
gggaggctggcgcgcggggtggag[A/G]agggcgtgaggaagcggtccaagt
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) HepG2 (hepatoblastoma) keratinocytes
- ASB for transcription factors
- SNAI2_HUMAN CTCF_HUMAN GMEB1_HUMAN SMCA4_HUMAN
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-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| SNAI2_HUMAN | 2.80 | -3.67 | 1.50 | n/a | No Hit | |||
| CTCF_HUMAN | 0.38 | 0.61 | 1.29 | n/a | No Hit | |||
| GMEB1_HUMAN | n/a | 2.43 | 2.00 | n/a | n/a | |||
| SMCA4_HUMAN | -0.41 | 1.71 | 1.94 | n/a | n/a |
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