ADASTRA v1.6.10
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rs535248
chr9:126940688
A
>
G
Sequence
atctcctgacctcgtgatccgtcg[A/G]acaggtatattcttatgctgttgt
ASB in cell types
foreskin keratinocyte
MCF7 (Invasive ductal breast carcinoma)
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Color scale
-log10 FDR of Ref (
A
) ASB
-log10 FDR of Alt (
G
) ASB
Details
Transcription factors
Cell types
Effect size Ref
(+4 others)
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Cell type
Effect size Ref
Effect size Alt
FDR Ref
FDR Alt
Mean BAD
foreskin keratinocyte
n/a
0.68
1.00
6.8·10
-5
2.50
MCF7 (Invasive ductal breast carcinoma)
0.21
0.58
0.85
2.5·10
-3
1.71
Items per page:
5
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Motif analysis
No data available
Genetic associations
GRASP
triglycerides
GTEx eQTL
Adipose_Subcutaneous
,
Artery_Tibial
,
Esophagus_Mucosa
,
Lung
,
Muscle_Skeletal
,
Skin_Not_Sun_Exposed_Suprapubic
,
Skin_Sun_Exposed_Lower_leg
,
Spleen
,
Testis
,
Thyroid
,
Whole_Blood
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Generated by ADASTRA database
2020.06.22 v1.6.10 Soos
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SNP set annotation with ANANASTRA
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