rs536110022 chr16:84949132 G>C
- Sequence
ttttgtctgtgtctgtgtgtgtgt[G/C]tgtctgtggttttgtctgtgtgtg
- ASB in cell types
- K562 (myelogenous leukemia) MCF7 (Invasive ductal breast carcinoma) GM12878 (female B-cells)
- ASB for transcription factors
- IRF5_HUMAN CDC5L_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (G) ASB
-log10 FDR of Alt (C) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| IRF5_HUMAN | 2.54 | -2.97 | 1.33 | n/a | n/a | |||
| CDC5L_HUMAN | 1.63 | n/a | 2.50 | n/a | n/a |
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