rs536141 chr11:117233820 C>A
- Sequence
caggcagacacctccaaaaacttc[C/A]cttaaattaatggagaatgctttg
- ASB in cell types
- K562 (myelogenous leukemia)
- ASB for transcription factors
- ATF4_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (C) ASB
-log10 FDR of Alt (A) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| ATF4_HUMAN | 2.10 | -1.93 | 2.00 | n/a | No Hit |
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Motif analysis
No data available
Genetic associations
GRASP comorbid depressive syndrome and alcohol dependence, diastolic blood pressure (dbp), hdl cholesterol, irritible bowel syndrome, maternal transmission distortion, total cholesterol
GTEx eQTL Adipose_Subcutaneous, Adrenal_Gland, Artery_Aorta, Artery_Tibial, Brain_Cerebellum, Colon_Sigmoid, Colon_Transverse, Esophagus_Gastroesophageal_Junction, Esophagus_Mucosa, Nerve_Tibial, Pancreas, Prostate, Skin_Not_Sun_Exposed_Suprapubic, Skin_Sun_Exposed_Lower_leg, Testis, Thyroid, Whole_Blood