rs536464 chr11:94238609 A>G
- Sequence
tttgctattgtgaatagtgccaca[A/G]taaacatacgtgcgcatgggtctt
- ASB in cell types
- HEK293 (embryonic kidney) HEK293T (embryonic kidney) K562 (myelogenous leukemia) 22RV1 (prostate carcinoma)
- ASB for transcription factors
- CTCF_HUMAN ZFX_HUMAN ZN768_HUMAN SUZ12_HUMAN
View in PheLiGe Color scale
-log10 FDR of Ref (A) ASB
-log10 FDR of Alt (G) ASB
Details
Transcription factors
Cell types
Uniprot ID | Effect size Ref | Effect size Alt | FDR Ref | FDR Alt | Mean BAD | Motif fold change | Motif concordance | |
|---|---|---|---|---|---|---|---|---|
| CTCF_HUMAN | 1.43 | 0.02 | 1.31 | n/a | No Hit | |||
| ZFX_HUMAN | 2.60 | 0.58 | 1.48 | n/a | No Hit | |||
| ZN768_HUMAN | 2.81 | -3.08 | 1.33 | n/a | No Hit | |||
| SUZ12_HUMAN | 3.22 | n/a | 2.00 | n/a | n/a | |||
| ZN350_HUMAN | 1.55 | -1.55 | 1.00 | n/a | No Hit |
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Motif analysis
